Index A | C | D | E | H | I | K | L | M | N | O | P | Q | R | S | T | U | W A Aerosol Atom C Collision-induced dissociation (CID) D De novo peptide sequencing E Electrospray ionization H HPLC-MS I Ion iTRAQ K KNIME L LC-MS LuciphorAdapter M m/z Mascot Mass MS(1) MS(2) MS/MS MSGFPlusAdapter mzData mzML mzXML N Nightly Snapshot O Octadecyl(C18) OMSSA OpenMS API Orbitrap analyzers P PepNovo Peptides Proteins Proteomics ProteoWizard pyOpenMS Q Quadrupole mass filters R RT S SILAC Spectra Spectrum SRM SWATH T Time-of-flight (TOF) TMT TOPP TOPP Tools TOPPAS TOPPView U UTILS W Workflow