TOPPAS#
An assistant for GUI-driven TOPP workflow design.
TOPPAS allows to create, edit, open, save, and run TOPP workflows. Pipelines can be created conveniently in a GUI by
means of mouse interactions. The parameters of all involved tools can be edited within the application and are also
saved as part of the pipeline definition in the .toppas
file. Furthermore, TOPPAS interactively performs validity
checks during the pipeline editing process, in order to make it more difficult to create an invalid workflow. Once set
up and saved, a workflow can also be run without the GUI using the ExecutePipeline
TOPP tool.
The following figure shows a simple example pipeline that has just been created and executed successfully:
More information about TOPPAS can be found in the TOPPAS tutorial.
The command line parameters of this tool are:
TOPPAS -- An assistant for GUI-driven TOPP workflow design.
Usage:
TOPPAS [options] [files]
Options are:
--help Shows this help
--debug Enables debug messages
-ini <File> Sets the INI file (default: ~/.TOPPAS.ini)